Awarded contract

GeoMx Digital Spatial Profiler and nCounter

  • Cardiff University

F15: Voluntary ex ante transparency notice

Notice reference: 2021/S 000-022907

Published 15 September 2021, 11:34am



Section one: Contracting authority/entity

one.1) Name and addresses

Cardiff University

Procurement Services, McKenzie House, 30-36 Newport Road

Cardiff

CF24 0DE

Email

procurement@cardiff.ac.uk

Telephone

+44 2920879648

Country

United Kingdom

NUTS code

UKL - Wales

Internet address(es)

Main address

http://www.cardiff.ac.uk/business/why-work-with-us/for-suppliers

Buyer's address

https://www.sell2wales.gov.wales/search/Search_AuthProfile.aspx?ID=AA0258

one.4) Type of the contracting authority

Body governed by public law

one.5) Main activity

Education


Section two: Object

two.1) Scope of the procurement

two.1.1) Title

GeoMx Digital Spatial Profiler and nCounter

Reference number

CU.732.TH

two.1.2) Main CPV code

  • 38432000 - Analysis apparatus

two.1.3) Type of contract

Supplies

two.1.4) Short description

NanoString GeoMX and nCounter instruments

two.1.6) Information about lots

This contract is divided into lots: No

two.1.7) Total value of the procurement (excluding VAT)

Value excluding VAT: £300,000

two.2) Description

two.2.2) Additional CPV code(s)

  • 38432000 - Analysis apparatus

two.2.3) Place of performance

NUTS codes
  • UKL22 - Cardiff and Vale of Glamorgan

two.2.4) Description of the procurement

The GeoMx DSP is a novel digital technology (proprietary

to NanoString) that is based on multiplexed measurement

of protein and nucleic acids and offers unparalleled levels of

precision coupled with the ability to quantify up to 96 proteins

and over 1000 RNA targets on a formalin-fixed, paraffinembedded

(FFPE) tissue section on a microscope slide.

two.2.11) Information about options

Options: No

two.2.13) Information about European Union Funds

The procurement is related to a project and/or programme financed by European Union funds: No


Section four. Procedure

four.1) Description

four.1.1) Type of procedure

Award of a contract without prior publication of a call for competition in the cases listed below

  • The procurement falls outside the scope of application of the regulations

Explanation:

The GeoMx Digital Spatial Profiler (DSP)

is only available from NanoString

Technologies, Inc.

The GeoMx DSP is a novel digital technology (proprietary

to NanoString) that is based on multiplexed measurement

of protein and nucleic acids and offers unparalleled levels of

precision coupled with the ability to quantify up to 96 proteins

and over 1000 RNA targets on a formalin-fixed, paraffinembedded

(FFPE) tissue section on a microscope slide.

In contrast to the sequential analysis of multi-target

immunohistochemistry (IHC) slides, the GeoMx DSP samples

all protein or RNA analytes on a single slide. This not only

shortens experiments and simplifies data analysis, but also

provides a higher multiplexing capacity (96 targets) all with

spatial context from Formalin-Fixed, Paraffin-Embedded

(FFPE) tissue sections.

Based on NanoString’s proprietary digital barcoding

technology, the GeoMx DSP platform measures local protein

levels, and can be combined with RNA expression, within

heterogeneous tissue samples. Combining both multiplexed

nucleic acid and protein on the same platform gives

researchers the ability to spatially resolve RNA when suitable

antibodies do not exist. The GeoMx DSP assay is performed on

the GeoMx DSP platform which includes imaging and fluidic

components to capture spatial context, and current nCounter®

or next-generation sequencing (NGS) instruments provide the

quantification.

Protein detection is enabled via primary antibodies which

are covalently attached via a UV photocleavable linker to

DNA indexing oligos. Following antigen retrieval, FFPE tissue

samples are stained with a multiplexed cocktail of labeled

antibodies, and DNA oligos are subsequently released by

UV light exposure across regions of interest. The liberated

DNA oligos are then hybridized to optical barcodes for

quantitation on an nCounter or NGS instrument. This

technique enables quantitative, multiplexed protein detection

up to 5.5 logs of dynamic range.

Key Features and Benefits of DSP technology

- Multiplex many analytes on one tissue section in

a single pass

- Quantitation based on linear single-molecule

counting: up to 5.5 logs

- Single-cell limit of detection

- Non-destructive: sample completely intact after assay

- Single antigen retrieval without effects from

order-of-addition

four.1.8) Information about the Government Procurement Agreement (GPA)

The procurement is covered by the Government Procurement Agreement: Yes


Section five. Award of contract/concession

Contract No

CU.732.TH

A contract/lot is awarded: Yes

five.2) Award of contract/concession

five.2.1) Date of conclusion of the contract

15 September 2021

five.2.2) Information about tenders

The contract has been awarded to a group of economic operators: No

five.2.3) Name and address of the contractor/concessionaire

NanoString Technologies

St. Marys Court, The Broadway

Amersham

HP70UT

Telephone

+44 7468604366

Country

United Kingdom

NUTS code
  • UK - United Kingdom
The contractor/concessionaire is an SME

Yes

five.2.4) Information on value of contract/lot/concession (excluding VAT)

Total value of the contract/lot/concession: £300,000


Section six. Complementary information

six.3) Additional information

(WA Ref:114050)

six.4) Procedures for review

six.4.1) Review body

High Court

Royal Courts of Justice, The Strand

London

WC2A 2LL

Telephone

+44 2079477501

Country

United Kingdom